Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Sf3b6P59708 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.01□□□□□ -0.17
Sf3b6P59708 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.01□□□□□ -0.17
Sf3b6P59708 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14□□□□□ -0.17
Sf3b6P59708 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3b6P59708 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sf3b6P59708 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gm11336-201ENSMUST00000118168 334 ntBASIC14□□□□□ -0.17
Sf3b6P59708 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sf3b6P59708 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gm7370-201ENSMUST00000219471 767 ntBASIC14□□□□□ -0.17
Sf3b6P59708 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sf3b6P59708 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14□□□□□ -0.17
Sf3b6P59708 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Sf3b6P59708 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3b6P59708 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sf3b6P59708 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sf3b6P59708 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm13436-201ENSMUST00000120418 567 ntBASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm13559-201ENSMUST00000120476 863 ntBASIC13.99□□□□□ -0.17
Sf3b6P59708 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm2274-201ENSMUST00000184539 609 ntBASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.99□□□□□ -0.17
Sf3b6P59708 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.99□□□□□ -0.17
Sf3b6P59708 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sf3b6P59708 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3b6P59708 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sf3b6P59708 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms