Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccr4P51680 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Ccr4P51680 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ccr4P51680 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ccr4P51680 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccr4P51680 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccr4P51680 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccr4P51680 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ccr4P51680 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.61□□□□□ -0.07
Ccr4P51680 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccr4P51680 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccr4P51680 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccr4P51680 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ccr4P51680 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccr4P51680 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ccr4P51680 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Ccr4P51680 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccr4P51680 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccr4P51680 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccr4P51680 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccr4P51680 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.59□□□□□ -0.07
Ccr4P51680 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccr4P51680 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Ccr4P51680 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccr4P51680 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccr4P51680 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccr4P51680 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccr4P51680 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccr4P51680 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.58□□□□□ -0.07
Ccr4P51680 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccr4P51680 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccr4P51680 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccr4P51680 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccr4P51680 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ccr4P51680 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms