Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Nedd4P46935 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.88■□□□□ 0.61
Nedd4P46935 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.88■□□□□ 0.61
Nedd4P46935 Gm12008-201ENSMUST00000117791 755 ntBASIC18.88■□□□□ 0.61
Nedd4P46935 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.88■□□□□ 0.61
Nedd4P46935 Gm38294-201ENSMUST00000192831 381 ntBASIC18.88■□□□□ 0.61
Nedd4P46935 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.88■□□□□ 0.61
Nedd4P46935 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Nedd4P46935 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nedd4P46935 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd4P46935 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.88■□□□□ 0.61
Nedd4P46935 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.87■□□□□ 0.61
Nedd4P46935 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.87■□□□□ 0.61
Nedd4P46935 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Gm17837-201ENSMUST00000186435 985 ntBASIC18.87■□□□□ 0.61
Nedd4P46935 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.87■□□□□ 0.61
Nedd4P46935 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.87■□□□□ 0.61
Nedd4P46935 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd4P46935 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nedd4P46935 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.86■□□□□ 0.61
Nedd4P46935 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd4P46935 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nedd4P46935 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nedd4P46935 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.85■□□□□ 0.61
Nedd4P46935 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.85■□□□□ 0.61
Nedd4P46935 Mir7684-201ENSMUST00000183858 60 ntBASIC18.85■□□□□ 0.61
Nedd4P46935 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.85■□□□□ 0.61
Nedd4P46935 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd4P46935 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nedd4P46935 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.84■□□□□ 0.61
Nedd4P46935 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.84■□□□□ 0.61
Nedd4P46935 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Nedd4P46935 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.84■□□□□ 0.61
Nedd4P46935 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Nedd4P46935 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.84■□□□□ 0.61
Nedd4P46935 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nedd4P46935 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nedd4P46935 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd4P46935 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Nedd4P46935 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms