Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-6P43688 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-6P43688 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-6P43688 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-6P43688 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Gm8344-201ENSMUST00000119813 856 ntBASIC14.87□□□□□ -0.03
Nkx2-6P43688 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.87□□□□□ -0.03
Nkx2-6P43688 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Gm25925-201ENSMUST00000158314 306 ntBASIC14.87□□□□□ -0.03
Nkx2-6P43688 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.87□□□□□ -0.03
Nkx2-6P43688 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-6P43688 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-6P43688 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Gm12260-201ENSMUST00000122447 411 ntBASIC14.86□□□□□ -0.03
Nkx2-6P43688 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.86□□□□□ -0.03
Nkx2-6P43688 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-6P43688 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm6736-201ENSMUST00000166583 948 ntBASIC14.85□□□□□ -0.03
Nkx2-6P43688 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Mir8117-201ENSMUST00000184773 107 ntBASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-6P43688 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Gm5682-201ENSMUST00000173402 505 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms