Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh2P43247 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh2P43247 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh2P43247 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.27■□□□□ 0.19
Msh2P43247 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh2P43247 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Msh2P43247 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Msh2P43247 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Msh2P43247 Gm6623-201ENSMUST00000173570 544 ntBASIC16.26■□□□□ 0.19
Msh2P43247 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.26■□□□□ 0.19
Msh2P43247 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Msh2P43247 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Msh2P43247 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Msh2P43247 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.26■□□□□ 0.19
Msh2P43247 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.26■□□□□ 0.19
Msh2P43247 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh2P43247 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.25■□□□□ 0.19
Msh2P43247 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh2P43247 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.25■□□□□ 0.19
Msh2P43247 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Msh2P43247 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.25■□□□□ 0.19
Msh2P43247 Gm29518-201ENSMUST00000190858 372 ntBASIC16.25■□□□□ 0.19
Msh2P43247 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.25■□□□□ 0.19
Msh2P43247 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Msh2P43247 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Msh2P43247 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Msh2P43247 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.24■□□□□ 0.19
Msh2P43247 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.24■□□□□ 0.19
Msh2P43247 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Msh2P43247 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.24■□□□□ 0.19
Msh2P43247 Gm17808-201ENSMUST00000200859 894 ntBASIC16.24■□□□□ 0.19
Msh2P43247 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Msh2P43247 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.23■□□□□ 0.19
Msh2P43247 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.23■□□□□ 0.19
Msh2P43247 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Msh2P43247 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.23■□□□□ 0.19
Msh2P43247 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Msh2P43247 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms