Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm27989-201ENSMUST00000184721 107 ntBASIC16.18■□□□□ 0.18
Cxcl12P40224 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.18■□□□□ 0.18
Cxcl12P40224 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cxcl12P40224 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cxcl12P40224 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Gm27306-201ENSMUST00000183970 107 ntBASIC16.17■□□□□ 0.18
Cxcl12P40224 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Gm17837-201ENSMUST00000186435 985 ntBASIC16.17■□□□□ 0.18
Cxcl12P40224 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Gm2423-201ENSMUST00000074863 733 ntBASIC16.17■□□□□ 0.18
Cxcl12P40224 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cxcl12P40224 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.17■□□□□ 0.18
Cxcl12P40224 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cxcl12P40224 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm13223-201ENSMUST00000118609 747 ntBASIC16.16■□□□□ 0.18
Cxcl12P40224 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.16■□□□□ 0.18
Cxcl12P40224 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.16■□□□□ 0.18
Cxcl12P40224 Gm2272-201ENSMUST00000194903 582 ntBASIC16.16■□□□□ 0.18
Cxcl12P40224 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.16■□□□□ 0.18
Cxcl12P40224 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cxcl12P40224 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cxcl12P40224 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cxcl12P40224 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
Cxcl12P40224 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.15■□□□□ 0.18
Cxcl12P40224 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Gm27618-201ENSMUST00000183671 60 ntBASIC16.15■□□□□ 0.18
Cxcl12P40224 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.15■□□□□ 0.18
Cxcl12P40224 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cxcl12P40224 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Cxcl12P40224 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cxcl12P40224 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cxcl12P40224 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.14■□□□□ 0.17
Cxcl12P40224 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.14■□□□□ 0.17
Cxcl12P40224 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.14■□□□□ 0.17
Cxcl12P40224 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.14■□□□□ 0.17
Cxcl12P40224 Gm10154-201ENSMUST00000084445 354 ntBASIC16.14■□□□□ 0.17
Cxcl12P40224 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cxcl12P40224 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cxcl12P40224 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms