Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LdlrP35951 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LdlrP35951 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LdlrP35951 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LdlrP35951 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LdlrP35951 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LdlrP35951 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LdlrP35951 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.68■□□□□ 0.1
LdlrP35951 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LdlrP35951 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.68■□□□□ 0.1
LdlrP35951 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.68■□□□□ 0.1
LdlrP35951 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.68■□□□□ 0.1
LdlrP35951 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.68■□□□□ 0.1
LdlrP35951 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.68■□□□□ 0.1
LdlrP35951 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LdlrP35951 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LdlrP35951 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LdlrP35951 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.67■□□□□ 0.1
LdlrP35951 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LdlrP35951 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LdlrP35951 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
LdlrP35951 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LdlrP35951 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LdlrP35951 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LdlrP35951 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LdlrP35951 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.66■□□□□ 0.1
LdlrP35951 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.66■□□□□ 0.1
LdlrP35951 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LdlrP35951 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LdlrP35951 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LdlrP35951 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.65■□□□□ 0.1
LdlrP35951 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LdlrP35951 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms