Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rom1P32958 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rom1P32958 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Rom1P32958 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rom1P32958 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rom1P32958 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rom1P32958 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rom1P32958 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Gm11539-201ENSMUST00000119837 557 ntBASIC12.48□□□□□ -0.41
Rom1P32958 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.48□□□□□ -0.41
Rom1P32958 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Gm20049-201ENSMUST00000219950 730 ntBASIC12.48□□□□□ -0.41
Rom1P32958 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rom1P32958 Gm10602-201ENSMUST00000098239 609 ntBASIC12.48□□□□□ -0.41
Rom1P32958 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rom1P32958 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.48□□□□□ -0.41
Rom1P32958 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rom1P32958 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Rom1P32958 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rom1P32958 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.47□□□□□ -0.41
Rom1P32958 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.47□□□□□ -0.41
Rom1P32958 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rom1P32958 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.47□□□□□ -0.41
Rom1P32958 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rom1P32958 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.47□□□□□ -0.41
Rom1P32958 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.47□□□□□ -0.41
Rom1P32958 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rom1P32958 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.46□□□□□ -0.41
Rom1P32958 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rom1P32958 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rom1P32958 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.46□□□□□ -0.41
Rom1P32958 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Rom1P32958 Gm8495-201ENSMUST00000188740 694 ntBASIC12.46□□□□□ -0.41
Rom1P32958 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rom1P32958 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rom1P32958 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rom1P32958 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rom1P32958 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.46□□□□□ -0.42
Rom1P32958 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.46□□□□□ -0.42
Rom1P32958 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms