Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Slc6a11P31650 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Slc6a11P31650 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a11P31650 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a11P31650 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.96□□□□□ -0.01
Slc6a11P31650 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Slc6a11P31650 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Gm25925-201ENSMUST00000158314 306 ntBASIC14.96□□□□□ -0.01
Slc6a11P31650 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Slc6a11P31650 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a11P31650 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a11P31650 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Slc6a11P31650 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Gm45328-201ENSMUST00000210942 917 ntBASIC14.95□□□□□ -0.02
Slc6a11P31650 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.95□□□□□ -0.02
Slc6a11P31650 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Slc6a11P31650 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a11P31650 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Slc6a11P31650 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Slc6a11P31650 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a11P31650 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms