Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.63□□□□□ -0.07
Nedd8P29595 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nedd8P29595 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Nedd8P29595 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.62□□□□□ -0.07
Nedd8P29595 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.62□□□□□ -0.07
Nedd8P29595 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.62□□□□□ -0.07
Nedd8P29595 Gm18025-201ENSMUST00000221733 862 ntBASIC14.62□□□□□ -0.07
Nedd8P29595 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nedd8P29595 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.62□□□□□ -0.07
Nedd8P29595 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.62□□□□□ -0.07
Nedd8P29595 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
Nedd8P29595 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nedd8P29595 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nedd8P29595 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nedd8P29595 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.61□□□□□ -0.07
Nedd8P29595 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Gm18958-201ENSMUST00000174258 762 ntBASIC14.61□□□□□ -0.07
Nedd8P29595 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Nedd8P29595 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nedd8P29595 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nedd8P29595 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nedd8P29595 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nedd8P29595 Actl10-202ENSMUST00000226583 1501 ntBASIC14.61□□□□□ -0.07
Nedd8P29595 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nedd8P29595 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nedd8P29595 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.6□□□□□ -0.07
Nedd8P29595 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nedd8P29595 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nedd8P29595 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nedd8P29595 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Gm12382-201ENSMUST00000122005 922 ntBASIC14.6□□□□□ -0.07
Nedd8P29595 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nedd8P29595 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Nedd8P29595 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nedd8P29595 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nedd8P29595 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nedd8P29595 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.6□□□□□ -0.07
Nedd8P29595 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nedd8P29595 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms