Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Gm7153-201ENSMUST00000117092 455 ntBASIC14.51□□□□□ -0.09
Cd40lgP27548 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.51□□□□□ -0.09
Cd40lgP27548 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40lgP27548 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40lgP27548 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.5□□□□□ -0.09
Cd40lgP27548 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.5□□□□□ -0.09
Cd40lgP27548 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cd40lgP27548 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40lgP27548 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cd40lgP27548 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cd40lgP27548 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cd40lgP27548 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.49□□□□□ -0.09
Cd40lgP27548 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40lgP27548 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd40lgP27548 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd40lgP27548 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms