Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Nfkb1P25799 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.16■□□□□ 0.18
Nfkb1P25799 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nfkb1P25799 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Nfkb1P25799 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nfkb1P25799 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.15■□□□□ 0.18
Nfkb1P25799 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Gm5264-201ENSMUST00000190584 848 ntBASIC16.15■□□□□ 0.18
Nfkb1P25799 Gm37935-201ENSMUST00000192012 982 ntBASIC16.15■□□□□ 0.18
Nfkb1P25799 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nfkb1P25799 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nfkb1P25799 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Gm8344-201ENSMUST00000119813 856 ntBASIC16.14■□□□□ 0.17
Nfkb1P25799 Gm15467-201ENSMUST00000120582 445 ntBASIC16.14■□□□□ 0.17
Nfkb1P25799 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Gm6257-201ENSMUST00000163864 910 ntBASIC16.14■□□□□ 0.17
Nfkb1P25799 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nfkb1P25799 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nfkb1P25799 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.13■□□□□ 0.17
Nfkb1P25799 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.13■□□□□ 0.17
Nfkb1P25799 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.13■□□□□ 0.17
Nfkb1P25799 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.13■□□□□ 0.17
Nfkb1P25799 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.13■□□□□ 0.17
Nfkb1P25799 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nfkb1P25799 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms