Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.17■□□□□ 0.34
Pde6bP23440 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.17■□□□□ 0.34
Pde6bP23440 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pde6bP23440 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pde6bP23440 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.16■□□□□ 0.34
Pde6bP23440 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6bP23440 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Gm14494-201ENSMUST00000118786 435 ntBASIC17.16■□□□□ 0.34
Pde6bP23440 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6bP23440 Gm2756-201ENSMUST00000195851 400 ntBASIC17.16■□□□□ 0.34
Pde6bP23440 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.16■□□□□ 0.34
Pde6bP23440 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pde6bP23440 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pde6bP23440 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pde6bP23440 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pde6bP23440 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pde6bP23440 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pde6bP23440 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.15■□□□□ 0.34
Pde6bP23440 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm8825-201ENSMUST00000182565 998 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm4518-201ENSMUST00000182638 718 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.15■□□□□ 0.34
Pde6bP23440 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.15■□□□□ 0.34
Pde6bP23440 Gm18622-201ENSMUST00000219361 595 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.15■□□□□ 0.34
Pde6bP23440 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pde6bP23440 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6bP23440 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6bP23440 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pde6bP23440 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pde6bP23440 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.14■□□□□ 0.33
Pde6bP23440 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.14■□□□□ 0.33
Pde6bP23440 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.14■□□□□ 0.33
Pde6bP23440 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms