Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa6P09092 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa6P09092 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Gm13036-201ENSMUST00000117799 748 ntBASIC13.53□□□□□ -0.24
Hoxa6P09092 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.53□□□□□ -0.24
Hoxa6P09092 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa6P09092 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa6P09092 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa6P09092 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa6P09092 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa6P09092 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Hoxa6P09092 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hoxa6P09092 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.24
Hoxa6P09092 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa6P09092 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa6P09092 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.52□□□□□ -0.24
Hoxa6P09092 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Gm15173-201ENSMUST00000122049 433 ntBASIC13.52□□□□□ -0.25
Hoxa6P09092 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Gm5364-201ENSMUST00000216789 889 ntBASIC13.52□□□□□ -0.25
Hoxa6P09092 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa6P09092 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa6P09092 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.51□□□□□ -0.25
Hoxa6P09092 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa6P09092 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.51□□□□□ -0.25
Hoxa6P09092 Gm8344-201ENSMUST00000119813 856 ntBASIC13.51□□□□□ -0.25
Hoxa6P09092 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.51□□□□□ -0.25
Hoxa6P09092 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.51□□□□□ -0.25
Hoxa6P09092 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa6P09092 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.51□□□□□ -0.25
Hoxa6P09092 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Gm15590-201ENSMUST00000078419 552 ntBASIC13.51□□□□□ -0.25
Hoxa6P09092 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa6P09092 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa6P09092 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa6P09092 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms