Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr2aP08775 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Polr2aP08775 Gm13453-201ENSMUST00000118708 357 ntBASIC17.8■□□□□ 0.44
Polr2aP08775 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.8■□□□□ 0.44
Polr2aP08775 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.8■□□□□ 0.44
Polr2aP08775 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.8■□□□□ 0.44
Polr2aP08775 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.8■□□□□ 0.44
Polr2aP08775 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.8■□□□□ 0.44
Polr2aP08775 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Polr2aP08775 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Rarb-207ENSMUST00000225921 2756 ntBASIC17.8■□□□□ 0.44
Polr2aP08775 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr2aP08775 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 Gm6912-201ENSMUST00000117218 544 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Polr2aP08775 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Gm8410-201ENSMUST00000117225 605 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Gm27989-201ENSMUST00000184721 107 ntBASIC17.79■□□□□ 0.44
Polr2aP08775 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Polr2aP08775 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Polr2aP08775 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Polr2aP08775 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.78■□□□□ 0.44
Polr2aP08775 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2aP08775 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.77■□□□□ 0.44
Polr2aP08775 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.77■□□□□ 0.44
Polr2aP08775 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Polr2aP08775 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.77■□□□□ 0.44
Polr2aP08775 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2aP08775 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2aP08775 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2aP08775 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2aP08775 Gm9794-201ENSMUST00000202370 423 ntBASIC17.77■□□□□ 0.43
Polr2aP08775 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2aP08775 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2aP08775 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.77■□□□□ 0.43
Polr2aP08775 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.76■□□□□ 0.43
Polr2aP08775 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Polr2aP08775 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Polr2aP08775 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.76■□□□□ 0.43
Polr2aP08775 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr2aP08775 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr2aP08775 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2aP08775 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms