Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
P06344 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
P06344 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.02□□□□□ -0.17
P06344 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
P06344 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
P06344 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
P06344 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
P06344 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
P06344 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.01□□□□□ -0.17
P06344 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.01□□□□□ -0.17
P06344 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P06344 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
P06344 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.01□□□□□ -0.17
P06344 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.01□□□□□ -0.17
P06344 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14□□□□□ -0.17
P06344 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
P06344 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14□□□□□ -0.17
P06344 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
P06344 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14□□□□□ -0.17
P06344 Gm18733-201ENSMUST00000173950 856 ntBASIC14□□□□□ -0.17
P06344 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14□□□□□ -0.17
P06344 Gm10060-201ENSMUST00000212002 111 ntBASIC14□□□□□ -0.17
P06344 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14□□□□□ -0.17
P06344 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14□□□□□ -0.17
P06344 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P06344 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14□□□□□ -0.17
P06344 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P06344 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
P06344 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.99□□□□□ -0.17
P06344 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.99□□□□□ -0.17
P06344 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.99□□□□□ -0.17
P06344 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.99□□□□□ -0.17
P06344 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.99□□□□□ -0.17
P06344 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.99□□□□□ -0.17
P06344 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.99□□□□□ -0.17
P06344 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.99□□□□□ -0.17
P06344 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.99□□□□□ -0.17
P06344 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.99□□□□□ -0.17
P06344 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.99□□□□□ -0.17
P06344 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.99□□□□□ -0.17
P06344 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.99□□□□□ -0.17
P06344 Gm8825-201ENSMUST00000182565 998 ntBASIC13.99□□□□□ -0.17
P06344 Gm4518-201ENSMUST00000182638 718 ntBASIC13.99□□□□□ -0.17
P06344 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.99□□□□□ -0.17
P06344 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.99□□□□□ -0.17
P06344 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.99□□□□□ -0.17
P06344 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.99□□□□□ -0.17
P06344 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.99□□□□□ -0.17
P06344 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.99□□□□□ -0.17
P06344 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P06344 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
P06344 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P06344 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms