Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Cops4O88544 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cops4O88544 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cops4O88544 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cops4O88544 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.57□□□□□ -0.08
Cops4O88544 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.57□□□□□ -0.08
Cops4O88544 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.57□□□□□ -0.08
Cops4O88544 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.57□□□□□ -0.08
Cops4O88544 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops4O88544 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.56□□□□□ -0.08
Cops4O88544 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.56□□□□□ -0.08
Cops4O88544 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.56□□□□□ -0.08
Cops4O88544 Gm36967-201ENSMUST00000193814 266 ntBASIC14.56□□□□□ -0.08
Cops4O88544 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.56□□□□□ -0.08
Cops4O88544 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cops4O88544 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.56□□□□□ -0.08
Cops4O88544 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cops4O88544 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cops4O88544 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Gm13186-201ENSMUST00000118031 316 ntBASIC14.55□□□□□ -0.08
Cops4O88544 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.55□□□□□ -0.08
Cops4O88544 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cops4O88544 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.55□□□□□ -0.08
Cops4O88544 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.55□□□□□ -0.08
Cops4O88544 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cops4O88544 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Cops4O88544 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms