Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cops3O88543 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cops3O88543 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.14□□□□□ -0.15
Cops3O88543 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Gm45058-201ENSMUST00000205810 766 ntBASIC14.14□□□□□ -0.15
Cops3O88543 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.14□□□□□ -0.15
Cops3O88543 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.14□□□□□ -0.15
Cops3O88543 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cops3O88543 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Cops3O88543 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops3O88543 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.13□□□□□ -0.15
Cops3O88543 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cops3O88543 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cops3O88543 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.13□□□□□ -0.15
Cops3O88543 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.13□□□□□ -0.15
Cops3O88543 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cops3O88543 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.13□□□□□ -0.15
Cops3O88543 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cops3O88543 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops3O88543 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cops3O88543 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cops3O88543 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops3O88543 Gm37722-201ENSMUST00000193757 208 ntBASIC14.12□□□□□ -0.15
Cops3O88543 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cops3O88543 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cops3O88543 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops3O88543 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops3O88543 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Cops3O88543 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.11□□□□□ -0.15
Cops3O88543 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.11□□□□□ -0.15
Cops3O88543 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops3O88543 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.11□□□□□ -0.15
Cops3O88543 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.11□□□□□ -0.15
Cops3O88543 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cops3O88543 Gm43799-201ENSMUST00000201845 579 ntBASIC14.11□□□□□ -0.15
Cops3O88543 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Gm18959-201ENSMUST00000208954 655 ntBASIC14.11□□□□□ -0.15
Cops3O88543 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms