Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Dnmt3aO88508 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.82■□□□□ 0.12
Dnmt3aO88508 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.82■□□□□ 0.12
Dnmt3aO88508 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.82■□□□□ 0.12
Dnmt3aO88508 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.82■□□□□ 0.12
Dnmt3aO88508 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Dnmt3aO88508 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Dnmt3aO88508 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.81■□□□□ 0.12
Dnmt3aO88508 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Gm25406-201ENSMUST00000157599 105 ntBASIC15.81■□□□□ 0.12
Dnmt3aO88508 Gm25745-201ENSMUST00000174945 133 ntBASIC15.81■□□□□ 0.12
Dnmt3aO88508 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Gm34391-201ENSMUST00000203706 907 ntBASIC15.81■□□□□ 0.12
Dnmt3aO88508 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Birc2-201ENSMUST00000054878 378 ntBASIC15.81■□□□□ 0.12
Dnmt3aO88508 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Dnmt3aO88508 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Gm24589-201ENSMUST00000116692 94 ntBASIC15.8■□□□□ 0.12
Dnmt3aO88508 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Dnmt3aO88508 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dnmt3aO88508 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dnmt3aO88508 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Dnmt3aO88508 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Dnmt3aO88508 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dnmt3aO88508 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms