Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Gm13559-201ENSMUST00000120476 863 ntBASIC14.13□□□□□ -0.15
NlkO54949 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.13□□□□□ -0.15
NlkO54949 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NlkO54949 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NlkO54949 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NlkO54949 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NlkO54949 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Gm15565-201ENSMUST00000118890 427 ntBASIC14.12□□□□□ -0.15
NlkO54949 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.12□□□□□ -0.15
NlkO54949 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.12□□□□□ -0.15
NlkO54949 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.12□□□□□ -0.15
NlkO54949 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.12□□□□□ -0.15
NlkO54949 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NlkO54949 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.12□□□□□ -0.15
NlkO54949 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NlkO54949 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.11□□□□□ -0.15
NlkO54949 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
NlkO54949 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NlkO54949 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Gm43799-201ENSMUST00000201845 579 ntBASIC14.11□□□□□ -0.15
NlkO54949 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NlkO54949 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.11□□□□□ -0.15
NlkO54949 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
NlkO54949 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NlkO54949 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NlkO54949 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NlkO54949 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NlkO54949 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NlkO54949 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.1□□□□□ -0.15
NlkO54949 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
NlkO54949 Gm16061-201ENSMUST00000122167 857 ntBASIC14.1□□□□□ -0.15
NlkO54949 Gm13474-201ENSMUST00000122466 815 ntBASIC14.1□□□□□ -0.15
NlkO54949 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.1□□□□□ -0.15
NlkO54949 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NlkO54949 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
NlkO54949 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NlkO54949 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NlkO54949 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms