Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Capn1O35350 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Capn1O35350 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Capn1O35350 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Capn1O35350 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Capn1O35350 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Capn1O35350 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.58□□□□□ -0.08
Capn1O35350 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Capn1O35350 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Capn1O35350 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.57□□□□□ -0.08
Capn1O35350 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Capn1O35350 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Capn1O35350 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.57□□□□□ -0.08
Capn1O35350 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.57□□□□□ -0.08
Capn1O35350 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.57□□□□□ -0.08
Capn1O35350 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Capn1O35350 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Capn1O35350 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Gm25745-201ENSMUST00000174945 133 ntBASIC14.56□□□□□ -0.08
Capn1O35350 Gm27525-201ENSMUST00000184465 107 ntBASIC14.56□□□□□ -0.08
Capn1O35350 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.56□□□□□ -0.08
Capn1O35350 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Capn1O35350 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Capn1O35350 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Capn1O35350 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Capn1O35350 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Capn1O35350 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Capn1O35350 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Capn1O35350 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Capn1O35350 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Capn1O35350 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.55□□□□□ -0.08
Capn1O35350 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms