Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Ebf3O08791 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.33■□□□□ 0.2
Ebf3O08791 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Gm6736-201ENSMUST00000166583 948 ntBASIC16.33■□□□□ 0.2
Ebf3O08791 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.33■□□□□ 0.2
Ebf3O08791 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.33■□□□□ 0.2
Ebf3O08791 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ebf3O08791 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ebf3O08791 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ebf3O08791 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ebf3O08791 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ebf3O08791 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebf3O08791 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.32■□□□□ 0.2
Ebf3O08791 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Ebf3O08791 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Gm43575-201ENSMUST00000196420 516 ntBASIC16.32■□□□□ 0.2
Ebf3O08791 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.32■□□□□ 0.2
Ebf3O08791 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.32■□□□□ 0.2
Ebf3O08791 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.32■□□□□ 0.2
Ebf3O08791 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.32■□□□□ 0.2
Ebf3O08791 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ebf3O08791 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebf3O08791 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
Ebf3O08791 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.31■□□□□ 0.2
Ebf3O08791 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ebf3O08791 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.31■□□□□ 0.2
Ebf3O08791 Gm9727-201ENSMUST00000161387 555 ntBASIC16.31■□□□□ 0.2
Ebf3O08791 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ebf3O08791 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.31■□□□□ 0.2
Ebf3O08791 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf3O08791 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ebf3O08791 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Ebf3O08791 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.3■□□□□ 0.2
Ebf3O08791 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.3■□□□□ 0.2
Ebf3O08791 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ebf3O08791 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.3■□□□□ 0.2
Ebf3O08791 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.3■□□□□ 0.2
Ebf3O08791 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.3■□□□□ 0.2
Ebf3O08791 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.3■□□□□ 0.2
Ebf3O08791 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.3■□□□□ 0.2
Ebf3O08791 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms