Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Nfil3O08750 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Gm7230-201ENSMUST00000173026 815 ntBASIC18.06■□□□□ 0.48
Nfil3O08750 Gm18733-201ENSMUST00000173950 856 ntBASIC18.06■□□□□ 0.48
Nfil3O08750 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.06■□□□□ 0.48
Nfil3O08750 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.06■□□□□ 0.48
Nfil3O08750 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.06■□□□□ 0.48
Nfil3O08750 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
Nfil3O08750 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.06■□□□□ 0.48
Nfil3O08750 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.06■□□□□ 0.48
Nfil3O08750 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nfil3O08750 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfil3O08750 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.05■□□□□ 0.48
Nfil3O08750 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nfil3O08750 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.05■□□□□ 0.48
Nfil3O08750 Gm27646-201ENSMUST00000183989 110 ntBASIC18.05■□□□□ 0.48
Nfil3O08750 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Gm2651-201ENSMUST00000203560 838 ntBASIC18.05■□□□□ 0.48
Nfil3O08750 Gm44771-201ENSMUST00000206975 626 ntBASIC18.05■□□□□ 0.48
Nfil3O08750 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.05■□□□□ 0.48
Nfil3O08750 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nfil3O08750 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfil3O08750 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nfil3O08750 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Nfil3O08750 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.04■□□□□ 0.48
Nfil3O08750 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nfil3O08750 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nfil3O08750 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.04■□□□□ 0.48
Nfil3O08750 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nfil3O08750 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Nfil3O08750 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfil3O08750 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.03■□□□□ 0.48
Nfil3O08750 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Gm8344-201ENSMUST00000119813 856 ntBASIC18.03■□□□□ 0.48
Nfil3O08750 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.03■□□□□ 0.48
Nfil3O08750 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.03■□□□□ 0.48
Nfil3O08750 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.03■□□□□ 0.48
Nfil3O08750 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.03■□□□□ 0.48
Nfil3O08750 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nfil3O08750 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.03■□□□□ 0.48
Nfil3O08750 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfil3O08750 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfil3O08750 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.02■□□□□ 0.48
Nfil3O08750 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfil3O08750 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nfil3O08750 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nfil3O08750 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Nfil3O08750 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nfil3O08750 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms