Protein–RNA interactions for Protein: J3QK56

4930544D05Rik, RIKEN cDNA 4930544D05 gene, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930544D05RikJ3QK56 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
4930544D05RikJ3QK56 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Gm13418-201ENSMUST00000119097 944 ntBASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Gm27741-201ENSMUST00000185060 237 ntBASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Gm5864-201ENSMUST00000202263 970 ntBASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
4930544D05RikJ3QK56 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Gm11780-201ENSMUST00000136880 516 ntBASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Gm8655-201ENSMUST00000221159 852 ntBASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4930544D05RikJ3QK56 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
4930544D05RikJ3QK56 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms