Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Gm27628-201ENSMUST00000184911 107 ntBASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 AW822252-206ENSMUST00000208904 237 ntBASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb9E9Q5G2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gm11764-201ENSMUST00000120221 623 ntBASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gm1401-201ENSMUST00000122048 772 ntBASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb9E9Q5G2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb9E9Q5G2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 App-207ENSMUST00000227737 2827 ntBASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Gm6443-201ENSMUST00000203599 874 ntBASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb9E9Q5G2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb9E9Q5G2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms