Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.4■□□□□ 0.54
Usp42B2RQC2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Gm25990-201ENSMUST00000102440 86 ntBASIC18.4■□□□□ 0.54
Usp42B2RQC2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.4■□□□□ 0.54
Usp42B2RQC2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.4■□□□□ 0.54
Usp42B2RQC2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp42B2RQC2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
Usp42B2RQC2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp42B2RQC2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp42B2RQC2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp42B2RQC2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Gm6376-201ENSMUST00000209407 580 ntBASIC18.38■□□□□ 0.53
Usp42B2RQC2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp42B2RQC2 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.38■□□□□ 0.53
Usp42B2RQC2 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.38■□□□□ 0.53
Usp42B2RQC2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Grk6-207ENSMUST00000225925 2769 ntBASIC18.38■□□□□ 0.53
Usp42B2RQC2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp42B2RQC2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Gm15358-201ENSMUST00000119249 520 ntBASIC18.37■□□□□ 0.53
Usp42B2RQC2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp42B2RQC2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Mir8098-201ENSMUST00000184011 137 ntBASIC18.36■□□□□ 0.53
Usp42B2RQC2 Gm6089-201ENSMUST00000197666 938 ntBASIC18.36■□□□□ 0.53
Usp42B2RQC2 Gm5864-201ENSMUST00000202263 970 ntBASIC18.36■□□□□ 0.53
Usp42B2RQC2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp42B2RQC2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp42B2RQC2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp42B2RQC2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp42B2RQC2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Usp42B2RQC2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp42B2RQC2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms