Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm12887B1AVM1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm12887B1AVM1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Gm37179-201ENSMUST00000194862 823 ntBASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Gm44450-201ENSMUST00000199528 114 ntBASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm12887B1AVM1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Gm18421-201ENSMUST00000204122 625 ntBASIC12.76□□□□□ -0.37
Gm12887B1AVM1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm12887B1AVM1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm12887B1AVM1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms