Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col4a6B1AVK5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col4a6B1AVK5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.06■□□□□ 0.16
Col4a6B1AVK5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gm18737-201ENSMUST00000173594 937 ntBASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gm5866-201ENSMUST00000177881 973 ntBASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Gm2423-201ENSMUST00000074863 733 ntBASIC16.05■□□□□ 0.16
Col4a6B1AVK5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Gm6415-201ENSMUST00000118488 348 ntBASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col4a6B1AVK5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.03■□□□□ 0.16
Col4a6B1AVK5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.03■□□□□ 0.16
Col4a6B1AVK5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a6B1AVK5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Gm27306-201ENSMUST00000183970 107 ntBASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a6B1AVK5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms