Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm13365-201ENSMUST00000121188 973 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Gm43474-201ENSMUST00000196415 774 ntBASIC13.25□□□□□ -0.29
Col6a4A2AX52 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a4A2AX52 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm15358-201ENSMUST00000119249 520 ntBASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm18622-201ENSMUST00000219361 595 ntBASIC13.24□□□□□ -0.29
Col6a4A2AX52 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.24□□□□□ -0.29
Col6a4A2AX52 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Mir6404-201ENSMUST00000183699 94 ntBASIC13.24□□□□□ -0.29
Col6a4A2AX52 Gm37153-201ENSMUST00000193637 231 ntBASIC13.24□□□□□ -0.29
Col6a4A2AX52 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a4A2AX52 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm11745-201ENSMUST00000121669 448 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm36967-201ENSMUST00000193814 266 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm15427-201ENSMUST00000117288 531 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.23□□□□□ -0.29
Col6a4A2AX52 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a4A2AX52 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms