Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.69□□□□□ -0.06
IsxA1A546 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IsxA1A546 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IsxA1A546 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
IsxA1A546 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IsxA1A546 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IsxA1A546 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IsxA1A546 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.68□□□□□ -0.06
IsxA1A546 Mir6982-201ENSMUST00000184354 68 ntBASIC14.68□□□□□ -0.06
IsxA1A546 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.68□□□□□ -0.06
IsxA1A546 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
IsxA1A546 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.68□□□□□ -0.06
IsxA1A546 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IsxA1A546 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Mir7071-201ENSMUST00000184847 69 ntBASIC14.67□□□□□ -0.06
IsxA1A546 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IsxA1A546 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IsxA1A546 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IsxA1A546 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.66□□□□□ -0.06
IsxA1A546 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Gm18025-201ENSMUST00000221733 862 ntBASIC14.66□□□□□ -0.06
IsxA1A546 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
IsxA1A546 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.66□□□□□ -0.06
IsxA1A546 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IsxA1A546 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IsxA1A546 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IsxA1A546 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms