Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc194A0A140LIT1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc194A0A140LIT1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc194A0A140LIT1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc194A0A140LIT1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc194A0A140LIT1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc194A0A140LIT1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc194A0A140LIT1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc194A0A140LIT1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc194A0A140LIT1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc194A0A140LIT1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 324.4 ms