Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm9172-201ENSMUST00000212092 954 ntBASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm10819-201ENSMUST00000099988 561 ntBASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv30A0A0B4J1P1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm12644-201ENSMUST00000119935 606 ntBASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm27867-201ENSMUST00000184778 125 ntBASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv30A0A0B4J1P1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm25745-201ENSMUST00000174945 133 ntBASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv30A0A0B4J1P1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv30A0A0B4J1P1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms