Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6n-6A0A075B6B2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Phf7-203ENSMUST00000226565 1971 ntBASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6n-6A0A075B6B2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6n-6A0A075B6B2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Mir5130-201ENSMUST00000175160 84 ntBASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6n-6A0A075B6B2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms