Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Timm23-208ENSMUST00000226683 750 ntBASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav4-2A0A075B638 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav4-2A0A075B638 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Gm37179-201ENSMUST00000194862 823 ntBASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms