Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv4A0A075B5I2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv4A0A075B5I2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm27867-201ENSMUST00000184778 125 ntBASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv4A0A075B5I2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trbv4A0A075B5I2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms