Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn8aQ9WTU3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn8aQ9WTU3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn8aQ9WTU3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Scn8aQ9WTU3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.77■□□□□ 0.11
Scn8aQ9WTU3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms