Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shroom3Q9QXN0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Shroom3Q9QXN0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Gm7230-201ENSMUST00000173026 815 ntBASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Grk6-207ENSMUST00000225925 2769 ntBASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Shroom3Q9QXN0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm7862-201ENSMUST00000121461 292 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm8825-201ENSMUST00000182565 998 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm4518-201ENSMUST00000182638 718 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Gm27702-201ENSMUST00000184512 56 ntBASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Shroom3Q9QXN0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms