Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Gm11539-201ENSMUST00000119837 557 ntBASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Gm29707-201ENSMUST00000196325 491 ntBASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmgn5Q9JL35 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn5Q9JL35 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hmgn5Q9JL35 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Gm12441-201ENSMUST00000121806 588 ntBASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn5Q9JL35 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn5Q9JL35 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgn5Q9JL35 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms