Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3bQ9ES34 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ube3bQ9ES34 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.71■□□□□ 0.59
Ube3bQ9ES34 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.71■□□□□ 0.59
Ube3bQ9ES34 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ube3bQ9ES34 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Gm18489-201ENSMUST00000172565 551 ntBASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube3bQ9ES34 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm14140-201ENSMUST00000119999 995 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Gm45167-201ENSMUST00000208007 322 ntBASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.69■□□□□ 0.58
Ube3bQ9ES34 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ube3bQ9ES34 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3bQ9ES34 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.68■□□□□ 0.58
Ube3bQ9ES34 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3bQ9ES34 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube3bQ9ES34 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms