Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim54Q9ERP3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim54Q9ERP3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim54Q9ERP3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm11764-201ENSMUST00000120221 623 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm45167-201ENSMUST00000208007 322 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.03■□□□□ 0.32
Trim54Q9ERP3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gm14822-201ENSMUST00000122247 291 ntBASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gm24513-201ENSMUST00000174964 138 ntBASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim54Q9ERP3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim54Q9ERP3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim54Q9ERP3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim54Q9ERP3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim54Q9ERP3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Gm27397-201ENSMUST00000184997 107 ntBASIC17.01■□□□□ 0.31
Trim54Q9ERP3 Gm2756-201ENSMUST00000195851 400 ntBASIC17.01■□□□□ 0.31
Trim54Q9ERP3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms