Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk4Q9ERK0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Gm7222-201ENSMUST00000117512 906 ntBASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Gm15467-201ENSMUST00000120582 445 ntBASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk4Q9ERK0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm11779-201ENSMUST00000118541 368 ntBASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.17■□□□□ 0.66
Ripk4Q9ERK0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk4Q9ERK0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Mir6404-201ENSMUST00000183699 94 ntBASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk4Q9ERK0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms