Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.53□□□□□ -0.08
Dap3Q9ER88 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Dap3Q9ER88 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.52□□□□□ -0.08
Dap3Q9ER88 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Dap3Q9ER88 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.52□□□□□ -0.09
Dap3Q9ER88 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Dap3Q9ER88 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Gm27011-201ENSMUST00000182352 972 ntBASIC14.51□□□□□ -0.09
Dap3Q9ER88 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.51□□□□□ -0.09
Dap3Q9ER88 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Dap3Q9ER88 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.5□□□□□ -0.09
Dap3Q9ER88 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.5□□□□□ -0.09
Dap3Q9ER88 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.5□□□□□ -0.09
Dap3Q9ER88 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Dap3Q9ER88 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms