Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps35Q9EQH3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Gm17971-201ENSMUST00000190239 806 ntBASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.8■□□□□ 0.12
Vps35Q9EQH3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps35Q9EQH3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps35Q9EQH3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps35Q9EQH3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms