Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Gm6443-201ENSMUST00000203599 874 ntBASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Gm18195-201ENSMUST00000207604 706 ntBASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdc40Q9DC48 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Gm18733-201ENSMUST00000173950 856 ntBASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Gm44454-201ENSMUST00000198541 138 ntBASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdc40Q9DC48 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cdc40Q9DC48 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdc40Q9DC48 Gm43514-201ENSMUST00000198852 424 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms