Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp2aQ9DB34 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Gm7506-201ENSMUST00000207758 815 ntBASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp2aQ9DB34 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Gm15372-201ENSMUST00000120729 834 ntBASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Gm43347-201ENSMUST00000200226 580 ntBASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp2aQ9DB34 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp2aQ9DB34 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp2aQ9DB34 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Chmp2aQ9DB34 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Mir6404-201ENSMUST00000183699 94 ntBASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp2aQ9DB34 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms