Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Gm15372-201ENSMUST00000120729 834 ntBASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.58■□□□□ 0.25
Ddx56Q9D0R4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ddx56Q9D0R4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx56Q9D0R4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm8825-201ENSMUST00000182565 998 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm4518-201ENSMUST00000182638 718 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms