Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc43Q9CR29 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc43Q9CR29 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Gm29518-201ENSMUST00000190858 372 ntBASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc43Q9CR29 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc43Q9CR29 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms