Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Gm9987-201ENSMUST00000069768 567 ntBASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rer1Q9CQU3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rer1Q9CQU3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rer1Q9CQU3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Gm6623-201ENSMUST00000173570 544 ntBASIC12.92□□□□□ -0.34
Rer1Q9CQU3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rer1Q9CQU3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms