Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTRAFQ9CQE8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTRAFQ9CQE8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTRAFQ9CQE8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RTRAFQ9CQE8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RTRAFQ9CQE8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Gm13148-201ENSMUST00000118892 745 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Gm12382-201ENSMUST00000122005 922 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Gm10517-202ENSMUST00000192970 758 ntBASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RTRAFQ9CQE8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Gm18958-201ENSMUST00000174258 762 ntBASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Gm18025-201ENSMUST00000221733 862 ntBASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RTRAFQ9CQE8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms