Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Gm11950-201ENSMUST00000121615 838 ntBASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb1Q9CQ70 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb1Q9CQ70 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
H2afb1Q9CQ70 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms